Reorder box: Drag and drop the icon to reorder the samples. All downstream analysis will maintain this order for visualization, unless reordered in the plot controls for the fish plot.
Colored circle: Each sample has an assigned color that is used to identify it in the Review Variants step. This color cannot be changed.
Sample name: Give the sample a biologically meaningful name. To edit the name, click the icon.
File name: Name of the uploaded file. You cannot edit the file name.
Cells: Total cells found in the sample by the primary analysis pipeline.
Total Reads: Total reads from the sequencing run.
Reads/Cell: Average reads per cell. Only the reads that mapped to cells are used. Reads with unidentified cell barcodes are excluded from this calculation.
Reads/Amplicon/Cell: Average reads per amplicon per cell. Only the reads that mapped to cells are used. Reads with unidentified cell barcodes are excluded from this calculation.
Barcodes: Yes means that barcodes were included in the .loom file. No means they were not. Loom files generated by Tapestri DNA Pipeline prior to version 1.10 did not include barcodes.
X: Delete the sample from the analysis.