Mission Bio Support Center Tapestri Pipeline FAQs Which sequence aligner does Pipeline use? Updated June 30, 2021 06:45 Tapestri DNA Pipeline uses the Burrows-Wheeler Aligner (BWA). Share this article: Was this article helpful? Yes No 0 out of 0 found this helpful Have more questions? Submit a request Related articles How do I create reference genome files and upload them to Tapestri Pipeline? Why won't my output files download? Tapestri Pipeline User Guide How does Pipeline call cells? What are the ADO rate, doublet rate, and LOD?