Yes, Tapestri libraries are fully compatible with non-Tapestri libraries as long as the indices – i7 for V1 chemistry, i5/i7 for V2 chemistry – are unique and allow all libraries to be uniquely identified.
Note: If the non-Tapestri and Tapestri libraries have different sizes, take extra care when quantifying and pooling the libraries. Contact support@missionbio.com for additional advice.