Which hg19 chromosomes are supported?

  • Updated

Tapestri Designer supports the entire genome for hg19 (GRCh37), not just the CDS regions of the genome. Users can submit non-CDS regions in any target format, except by definition gene, and Designer will resolve it to the corresponding regions and design for it.

Chr Total Length (bp)
1 249,250,621
2 243,199,373
3 198,022,430
4 191,154,276
5 180,915,260
6 171,115,067
7 159,138,663
8 146,364,022
9 141,213,431
10 135,534,747 
11 135,006,516
12 133,851,895
13 115,169,878
14 107,349,540
15 102,531,392
16 90,354,753
17 81,195,210
18 78,077,248
19 59,128,983
20 63,025,520
21 48,129,895
22 51,304,566
X* 155,270,560
Y* 59,373,566
7_gl000195_random 182,896
Un_gl000213* 164,239

* U, X, and Y must be capitalized. 

Results will take time to process. If the panel includes any non-CDS targets, then the processing time will be much longer because the amplicons are designed from scratch instead of using cached amplicons.

# of Targets

# of Amplicons

Panel Size (KB)

Coverage (%)

Time

171

162

34.7

97.08

52 minutes

298

259

55.4

97.99

1 hour, 38 minutes,

441

358

65.1

81.18

2 hours, 15 minutes

650

564

103.0

86.92

2 hours, 41 minutes

1,318

640

135.7

99.71

2 hours, 53 minutes

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