File: cell.barcode.distribution.tsv.zip

  • Updated

Barcode.cell.distribution.merged.png

A file that reports the number of forward reads assigned to each amplicon for each cell found in a run. 

The rows list the barcodes and the columns the amplicons. The number of barcodes is the number of rows minus one, which accounts for the header row.

Pipeline V2

The file is named barcode.cell.distribution.merged.tsv. A file that reports the number of forward reads assigned to each amplicon for each cell found for all tubes in a run. This file combines the index-specific files, such as rg0.barcode.cell.coverage.tsv for tube 1 and rg1.barcode.cell.coverage.tsv for tube 2.

GE output file SAMPLE_NAME_cell_barcode_distribution.tsv is similar to the file produced by V2 Pipeline.

Share this article:

Was this article helpful?

1 out of 1 found this helpful

Have more questions? Submit a request