Sample format
- Cryopreserved samples, such as 10 % DMSO + media/FBS
- Cultured cells
- Fresh tissue biopsies – Use Nuclei Extraction protocol or publicly available enzymatically dissociation, DNase-free protocols
- OCT-embedded tissues – Use Nuclei Extraction protocol
- Alcohol-based fixed cells, such as acetic acid, EtOH, and MeOH
- Maximum cell size must not exceed 30 µm
Tissue types
- Cell lines, such as K562 and RAJI
- PBMCs
- Bone-marrow-derived cells
- Breast tumor
- Lung tumor
- Colorectal tumor
- Prostate tumor
- Astrocytoma
- Glioblastoma multiforme
- Pancreatic tumor
- Chest wall soft tissue metastatic tissue melanoma
- Lung metastatic tissue melanoma
- Liver metastatic tissue melanoma
- Liver
- Patient-derived xenograft (PDX) samples, such as mouse
- Mouse-derived cells
- Viral-infected cells
Not yet validated
- Formalin-fixed paraffin-embedded (FFPE) samples
- Paraformaldehyde (PFA) fixed cells
- Frozen cell pellets
- Circulating tumor cells (CTCs)
- Sperm cells
Not supported
- Cell-free DNA (cfDNA)
- Prokaryotes