[panel-id]-design-summary.csv is a 13-column CSV file listing the amplicon ID, chromosome, amplicon coordinates, insert coordinates, forward/reverse primer and amplicon sequence, reference genome, review, targets and source panel for amplicons. Review flag defines whether the amplicon has an associated QC failure as seen in the QC summary file.
For RNA panels it shows the gene to which the amplicons belongs, increasing the column number to 14.
It shows one-based, fully closed coordinates for amplicons and inserts.
View more details about the coordinate system here.
For custom panels with predesigned workflow, the predesigned and newly created amplicon information will be available in the same format as above. The predesigned amplicons will have a different AmpID prefix: TAMPL.